Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC092850.2-201ENST00000623821 2697 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RPS2P28-201ENST00000314255 741 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC108073.2-201ENST00000464002 357 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 CXCL1P1-201ENST00000502804 216 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RNPS1P1-201ENST00000507437 918 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC006486.2-201ENST00000624246 2199 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 AC087481.3-201ENST00000602886 1894 ntBASIC11.17□□□□□ -0.62
CDC42SE2Q9NRR3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 AP002414.2-201ENST00000591780 3365 ntBASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE2Q9NRR3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms