Protein–RNA interactions for Protein: Q9NP55

BPIFA1, BPI fold-containing family A member 1, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA1Q9NP55 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BPIFA1Q9NP55 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
BPIFA1Q9NP55 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
BPIFA1Q9NP55 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 TSEN15P1-201ENST00000423257 515 ntBASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SPDYE14P-201ENST00000442619 822 ntBASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC109322.1-201ENST00000524499 1264 ntBASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC024267.1-201ENST00000582320 895 ntBASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 LINC00628-201ENST00000628516 1289 ntBASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.22■□□□□ 0.19
BPIFA1Q9NP55 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BPIFA1Q9NP55 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
BPIFA1Q9NP55 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BPIFA1Q9NP55 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BPIFA1Q9NP55 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BPIFA1Q9NP55 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BPIFA1Q9NP55 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
BPIFA1Q9NP55 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms