Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 MRPL20P1-201ENST00000400819 433 ntBASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 AC105339.3-201ENST00000560043 636 ntBASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHAMP1Q96JM3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 AC134407.2-201ENST00000625089 1978 ntBASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 AC105250.1-201ENST00000509378 2057 ntBASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 AC093724.1-201ENST00000448659 1027 ntBASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 FAM197Y8-203ENST00000450145 560 ntBASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHAMP1Q96JM3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
CHAMP1Q96JM3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CHAMP1Q96JM3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AC007686.3-201ENST00000619017 3487 ntBASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 AC079781.3-201ENST00000449110 356 ntBASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.76■□□□□ 0.59
CHAMP1Q96JM3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms