Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AC134407.2-201ENST00000625089 1978 ntBASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AC241585.1-201ENST00000433527 519 ntBASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 SERBP1P3-201ENST00000459980 809 ntBASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 AC100757.3-201ENST00000622361 1406 ntBASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAM1L1Q8N609 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AC011477.6-201ENST00000604980 1927 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 CDC14C-201ENST00000428251 1719 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 MIR770-201ENST00000390219 98 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 FO393414.2-201ENST00000405153 598 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 BASP1P1-201ENST00000430708 665 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL355385.1-201ENST00000606123 409 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL390754.1-201ENST00000619088 582 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AL590560.3-201ENST00000623350 461 ntBASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms