Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 CICP14-201ENST00000629111 2732 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 SSR4P1-203ENST00000599569 2260 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 KRT18P34-201ENST00000488218 1270 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 OR7E14P-202ENST00000530490 1290 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AC109635.5-201ENST00000533593 962 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AC005593.1-201ENST00000624894 515 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AL358472.4-201ENST00000633140 710 ntBASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01561Q8N1V8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
LINC01561Q8N1V8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC087481.3-201ENST00000602886 1894 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 FLJ16779-201ENST00000612722 7638 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms