Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LINC00346Q8IVM7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC074386.1-202ENST00000463561 864 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 PDPK2P-202ENST00000562415 1191 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC140113.2-201ENST00000604370 208 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AC092865.6-201ENST00000642101 219 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 AP002414.2-201ENST00000591780 3365 ntBASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00346Q8IVM7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 WASH6P-202ENST00000359512 1437 ntBASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms