Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SRLQ86TD4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.18■□□□□ 0.34
SRLQ86TD4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.18■□□□□ 0.34
SRLQ86TD4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
SRLQ86TD4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 CXCL1P1-201ENST00000502804 216 ntBASIC17.18■□□□□ 0.34
SRLQ86TD4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.18■□□□□ 0.34
SRLQ86TD4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.18■□□□□ 0.34
SRLQ86TD4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.18■□□□□ 0.34
SRLQ86TD4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 AC007292.2-201ENST00000593524 1812 ntBASIC17.18■□□□□ 0.34
SRLQ86TD4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.18■□□□□ 0.34
SRLQ86TD4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.18■□□□□ 0.34
SRLQ86TD4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRLQ86TD4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRLQ86TD4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SRLQ86TD4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.17■□□□□ 0.34
SRLQ86TD4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
SRLQ86TD4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.17■□□□□ 0.34
SRLQ86TD4 AC096734.2-201ENST00000562054 433 ntBASIC17.17■□□□□ 0.34
SRLQ86TD4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SRLQ86TD4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.17■□□□□ 0.34
SRLQ86TD4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.17■□□□□ 0.34
SRLQ86TD4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRLQ86TD4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRLQ86TD4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 KRT8P49-201ENST00000604166 1432 ntBASIC17.16■□□□□ 0.34
SRLQ86TD4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.16■□□□□ 0.34
SRLQ86TD4 ACTL9-202ENST00000612068 1252 ntBASIC17.16■□□□□ 0.34
SRLQ86TD4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 AC010507.1-201ENST00000633895 436 ntBASIC17.16■□□□□ 0.34
SRLQ86TD4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SRLQ86TD4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRLQ86TD4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SRLQ86TD4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.15■□□□□ 0.34
SRLQ86TD4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRLQ86TD4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.15■□□□□ 0.34
SRLQ86TD4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRLQ86TD4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRLQ86TD4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRLQ86TD4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.15■□□□□ 0.34
SRLQ86TD4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SRLQ86TD4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRLQ86TD4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms