Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AC063926.2-201ENST00000623766 1308 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 PMS2P4-201ENST00000412466 1052 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AC023141.13-201ENST00000604991 943 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 GGTLC5P-201ENST00000617623 998 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AC091812.2-201ENST00000619081 385 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AL513210.1-201ENST00000629608 234 ntBASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 AC025580.3-201ENST00000617932 1424 ntBASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 AC132938.5-201ENST00000624980 1813 ntBASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 IGLL3P-201ENST00000412472 434 ntBASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 AL035252.4-201ENST00000624174 288 ntBASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 AL805961.1-202ENST00000641562 540 ntBASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHRFAM7AQ494W8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRFAM7AQ494W8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms