Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC091951.1-201ENST00000512854 2465 ntBASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC233702.3-201ENST00000578656 1387 ntBASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 MIR600HG-201ENST00000449175 5984 ntBASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC087163.2-201ENST00000457299 853 ntBASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PRELID1P1-202ENST00000567272 903 ntBASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ANKRD55Q3KP44 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 TOB2P1-201ENST00000469761 992 ntBASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AP000867.3-201ENST00000524675 377 ntBASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC064862.7-201ENST00000604520 867 ntBASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC005089.1-201ENST00000619486 2241 ntBASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 LINC01101-201ENST00000622953 1884 ntBASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ANKRD55Q3KP44 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms