Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 AP002414.2-201ENST00000591780 3365 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.72□□□□□ -0.21
SSBP1Q04837 IGHV3-47-201ENST00000425060 335 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 SLC25A6P2-201ENST00000497974 877 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 AC063952.2-201ENST00000498792 1227 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.72□□□□□ -0.21
SSBP1Q04837 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SSBP1Q04837 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.72□□□□□ -0.21
SSBP1Q04837 AC006011.2-201ENST00000621313 1158 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 PI4KAP1-204ENST00000612579 1703 ntBASIC13.72□□□□□ -0.21
SSBP1Q04837 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SSBP1Q04837 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSBP1Q04837 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP1Q04837 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SSBP1Q04837 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SSBP1Q04837 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 AC021097.1-201ENST00000607902 574 ntBASIC13.71□□□□□ -0.21
SSBP1Q04837 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP1Q04837 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SSBP1Q04837 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP1Q04837 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP1Q04837 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.71□□□□□ -0.22
SSBP1Q04837 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 AP003680.1-201ENST00000598970 3660 ntBASIC13.71□□□□□ -0.22
SSBP1Q04837 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 WASH6P-202ENST00000359512 1437 ntBASIC13.71□□□□□ -0.22
SSBP1Q04837 AP005117.1-201ENST00000584346 1413 ntBASIC13.71□□□□□ -0.22
SSBP1Q04837 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP1Q04837 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms