Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CACNA1BQ00975 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CACNA1BQ00975 LYSMD4-203ENST00000378904 2122 ntBASIC14.77□□□□□ -0.04
CACNA1BQ00975 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA1BQ00975 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.77□□□□□ -0.04
CACNA1BQ00975 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 CD8B2-202ENST00000417670 633 ntBASIC14.77□□□□□ -0.05
CACNA1BQ00975 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.77□□□□□ -0.05
CACNA1BQ00975 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA1BQ00975 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 COX20P1-201ENST00000366529 357 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC025279.2-201ENST00000569730 653 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC138894.2-201ENST00000602838 371 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ACTG1P2-201ENST00000415776 1125 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ACTG1P11-201ENST00000425411 1125 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AC103691.2-201ENST00000618824 433 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 AL021920.2-201ENST00000624828 1351 ntBASIC14.76□□□□□ -0.05
CACNA1BQ00975 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA1BQ00975 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA1BQ00975 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CACNA1BQ00975 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA1BQ00975 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms