Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC097359.2-201ENST00000604992 2389 ntBASIC16.95■□□□□ 0.3
CBX1P83916 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CBX1P83916 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.95■□□□□ 0.3
CBX1P83916 KRT16P5-201ENST00000455284 522 ntBASIC16.95■□□□□ 0.3
CBX1P83916 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.95■□□□□ 0.3
CBX1P83916 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.95■□□□□ 0.3
CBX1P83916 AC112698.1-201ENST00000510299 916 ntBASIC16.95■□□□□ 0.3
CBX1P83916 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.95■□□□□ 0.3
CBX1P83916 IKBKGP1-201ENST00000612193 1073 ntBASIC16.95■□□□□ 0.3
CBX1P83916 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.95■□□□□ 0.3
CBX1P83916 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 AL139011.1-202ENST00000642063 584 ntBASIC16.95■□□□□ 0.3
CBX1P83916 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 AC083964.2-201ENST00000623988 2396 ntBASIC16.95■□□□□ 0.3
CBX1P83916 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX1P83916 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX1P83916 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CBX1P83916 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX1P83916 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX1P83916 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.94■□□□□ 0.3
CBX1P83916 DUX4L17-201ENST00000557360 1267 ntBASIC16.94■□□□□ 0.3
CBX1P83916 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.94■□□□□ 0.3
CBX1P83916 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.94■□□□□ 0.3
CBX1P83916 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.94■□□□□ 0.3
CBX1P83916 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 MTDHP1-201ENST00000605323 784 ntBASIC16.94■□□□□ 0.3
CBX1P83916 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CBX1P83916 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CBX1P83916 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CBX1P83916 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CBX1P83916 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX1P83916 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CBX1P83916 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CBX1P83916 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms