Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 MROH4P-201ENST00000431302 1578 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 AL353732.1-201ENST00000569618 1459 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 ARMC10P1-201ENST00000313754 855 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 HAUS4P1-201ENST00000406739 1145 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 PMS2P1-201ENST00000431037 1228 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 ATP5G2P1-201ENST00000433580 426 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.78□□□□□ -0.04
CXCR4P61073 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.78□□□□□ -0.04
CXCR4P61073 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.78□□□□□ -0.04
CXCR4P61073 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.78□□□□□ -0.04
CXCR4P61073 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCR4P61073 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCR4P61073 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.77□□□□□ -0.04
CXCR4P61073 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CXCR4P61073 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CXCR4P61073 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CXCR4P61073 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CXCR4P61073 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CXCR4P61073 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCR4P61073 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCR4P61073 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 AC087163.2-201ENST00000457299 853 ntBASIC14.77□□□□□ -0.05
CXCR4P61073 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 AC087641.1-201ENST00000557561 1021 ntBASIC14.77□□□□□ -0.05
CXCR4P61073 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.77□□□□□ -0.05
CXCR4P61073 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCR4P61073 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCR4P61073 AGAP7P-201ENST00000582299 2062 ntBASIC14.77□□□□□ -0.05
CXCR4P61073 AGAP14-201ENST00000624701 2060 ntBASIC14.77□□□□□ -0.05
CXCR4P61073 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CXCR4P61073 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.76□□□□□ -0.05
CXCR4P61073 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCR4P61073 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCR4P61073 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCR4P61073 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCR4P61073 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCR4P61073 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCR4P61073 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms