Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SUMO3P55854 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 AL365203.3-201ENST00000609742 2057 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.62□□□□□ -0.07
SUMO3P55854 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SUMO3P55854 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SUMO3P55854 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.61□□□□□ -0.07
SUMO3P55854 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 AL136982.4-201ENST00000437689 1740 ntBASIC14.61□□□□□ -0.07
SUMO3P55854 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SUMO3P55854 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 SPDYE17-201ENST00000412399 783 ntBASIC14.61□□□□□ -0.07
SUMO3P55854 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.61□□□□□ -0.07
SUMO3P55854 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.61□□□□□ -0.07
SUMO3P55854 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.61□□□□□ -0.07
SUMO3P55854 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.61□□□□□ -0.07
SUMO3P55854 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SUMO3P55854 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.61□□□□□ -0.07
SUMO3P55854 RN7SL828P-201ENST00000607615 303 ntBASIC14.61□□□□□ -0.07
SUMO3P55854 AC134407.2-201ENST00000625089 1978 ntBASIC14.61□□□□□ -0.07
SUMO3P55854 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SUMO3P55854 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SUMO3P55854 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.61□□□□□ -0.07
SUMO3P55854 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SUMO3P55854 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 BNIP3P1-202ENST00000550043 1585 ntBASIC14.6□□□□□ -0.07
SUMO3P55854 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 KRT8P37-201ENST00000451609 1420 ntBASIC14.6□□□□□ -0.07
SUMO3P55854 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SUMO3P55854 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.6□□□□□ -0.07
SUMO3P55854 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.6□□□□□ -0.07
SUMO3P55854 AL133215.2-201ENST00000609242 977 ntBASIC14.6□□□□□ -0.07
SUMO3P55854 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 Z92544.3-201ENST00000624747 417 ntBASIC14.6□□□□□ -0.07
SUMO3P55854 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.6□□□□□ -0.07
SUMO3P55854 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 KRT18P28-201ENST00000453838 1332 ntBASIC14.6□□□□□ -0.07
SUMO3P55854 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.6□□□□□ -0.07
SUMO3P55854 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms