Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
CXCL5P42830 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CXCL5P42830 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CXCL5P42830 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 AL031133.1-201ENST00000406807 723 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.98□□□□□ -0.65
CXCL5P42830 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.98□□□□□ -0.65
CXCL5P42830 AP000867.3-201ENST00000524675 377 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.98□□□□□ -0.65
CXCL5P42830 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 REXO1L3P-201ENST00000622202 1288 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 AC116407.4-201ENST00000623319 1061 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 PGM5P2-202ENST00000637225 1043 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 AC066615.1-201ENST00000640911 628 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 AL359258.3-201ENST00000622910 2331 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CXCL5P42830 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
CXCL5P42830 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 AC069224.1-201ENST00000566372 1715 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.98□□□□□ -0.65
CXCL5P42830 HARS-204ENST00000438307 1789 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CXCL5P42830 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
CXCL5P42830 U82695.1-201ENST00000635752 1889 ntBASIC10.98□□□□□ -0.65
CXCL5P42830 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms