Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 MTND6P24-201ENST00000440466 518 ntBASIC16.75■□□□□ 0.27
SCNN1AP37088 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.75■□□□□ 0.27
SCNN1AP37088 KLF2P3-201ENST00000451977 1087 ntBASIC16.75■□□□□ 0.27
SCNN1AP37088 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.75■□□□□ 0.27
SCNN1AP37088 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.75■□□□□ 0.27
SCNN1AP37088 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.75■□□□□ 0.27
SCNN1AP37088 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.75■□□□□ 0.27
SCNN1AP37088 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.75■□□□□ 0.27
SCNN1AP37088 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.75■□□□□ 0.27
SCNN1AP37088 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.74■□□□□ 0.27
SCNN1AP37088 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SCNN1AP37088 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.74■□□□□ 0.27
SCNN1AP37088 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCNN1AP37088 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.74■□□□□ 0.27
SCNN1AP37088 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SCNN1AP37088 AC136604.1-201ENST00000418535 575 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.74■□□□□ 0.27
SCNN1AP37088 METTL21AP1-201ENST00000438852 635 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.74■□□□□ 0.27
SCNN1AP37088 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.74■□□□□ 0.27
SCNN1AP37088 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.74■□□□□ 0.27
SCNN1AP37088 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SCNN1AP37088 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.74■□□□□ 0.27
SCNN1AP37088 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.74■□□□□ 0.27
SCNN1AP37088 AL589739.1-201ENST00000607720 493 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 AC093028.1-201ENST00000622998 982 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.74■□□□□ 0.27
SCNN1AP37088 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.74■□□□□ 0.27
SCNN1AP37088 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.74■□□□□ 0.27
SCNN1AP37088 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 FO538757.1-201ENST00000623083 1397 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 AC007950.2-201ENST00000615045 2347 ntBASIC16.74■□□□□ 0.27
SCNN1AP37088 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCNN1AP37088 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SCNN1AP37088 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
SCNN1AP37088 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.73■□□□□ 0.27
SCNN1AP37088 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
SCNN1AP37088 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.73■□□□□ 0.27
SCNN1AP37088 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCNN1AP37088 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCNN1AP37088 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms