Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHKAP35790 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CHKAP35790 AC144831.1-201ENST00000573312 2656 ntBASIC17.11■□□□□ 0.33
CHKAP35790 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHKAP35790 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHKAP35790 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHKAP35790 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.1■□□□□ 0.33
CHKAP35790 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 AC069262.1-201ENST00000539058 672 ntBASIC17.1■□□□□ 0.33
CHKAP35790 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.1■□□□□ 0.33
CHKAP35790 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 AC073389.1-201ENST00000595595 795 ntBASIC17.1■□□□□ 0.33
CHKAP35790 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.1■□□□□ 0.33
CHKAP35790 Z92544.3-201ENST00000624747 417 ntBASIC17.1■□□□□ 0.33
CHKAP35790 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHKAP35790 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHKAP35790 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.1■□□□□ 0.33
CHKAP35790 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHKAP35790 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.09■□□□□ 0.33
CHKAP35790 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.09■□□□□ 0.33
CHKAP35790 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.09■□□□□ 0.33
CHKAP35790 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.09■□□□□ 0.33
CHKAP35790 AC026150.2-201ENST00000564693 1156 ntBASIC17.09■□□□□ 0.33
CHKAP35790 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHKAP35790 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.09■□□□□ 0.33
CHKAP35790 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHKAP35790 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHKAP35790 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHKAP35790 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHKAP35790 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CHKAP35790 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHKAP35790 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHKAP35790 REXO1L8P-201ENST00000604378 1897 ntBASIC17.08■□□□□ 0.33
CHKAP35790 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CHKAP35790 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CHKAP35790 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHKAP35790 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHKAP35790 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.08■□□□□ 0.32
CHKAP35790 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.08■□□□□ 0.32
CHKAP35790 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHKAP35790 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.08■□□□□ 0.32
CHKAP35790 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHKAP35790 PRYP6-201ENST00000514804 343 ntBASIC17.08■□□□□ 0.32
CHKAP35790 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.08■□□□□ 0.32
CHKAP35790 ALG1L8P-201ENST00000533887 760 ntBASIC17.08■□□□□ 0.32
CHKAP35790 AL138918.1-201ENST00000568306 659 ntBASIC17.08■□□□□ 0.32
CHKAP35790 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.08■□□□□ 0.32
CHKAP35790 AC093512.1-201ENST00000617969 520 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms