Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 CICP8-201ENST00000455800 2813 ntBASIC13.62□□□□□ -0.23
CXCL3P19876 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 MMP23A-201ENST00000234610 1017 ntBASIC13.62□□□□□ -0.23
CXCL3P19876 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 HMGA1P5-201ENST00000412453 271 ntBASIC13.62□□□□□ -0.23
CXCL3P19876 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCL3P19876 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 AC034232.1-201ENST00000506026 1064 ntBASIC13.62□□□□□ -0.23
CXCL3P19876 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCL3P19876 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 FAM87A-204ENST00000613235 858 ntBASIC13.62□□□□□ -0.23
CXCL3P19876 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CXCL3P19876 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CXCL3P19876 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CXCL3P19876 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL3P19876 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCL3P19876 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL3P19876 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 AC136759.1-202ENST00000530858 2194 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CXCL3P19876 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 FAM220CP-201ENST00000395253 831 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 ACTG1P4-201ENST00000425123 1122 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 TSPY15P-201ENST00000457163 923 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL3P19876 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL3P19876 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL3P19876 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 AC005332.3-201ENST00000589904 676 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL3P19876 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.61□□□□□ -0.23
CXCL3P19876 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL3P19876 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 FLJ16779-201ENST00000612722 7638 ntBASIC13.61□□□□□ -0.23
CXCL3P19876 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CXCL3P19876 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms