Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCA1O95477 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ABCA1O95477 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.61□□□□□ -0.23
ABCA1O95477 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ABCA1O95477 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 AC092053.1-201ENST00000605787 1936 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.6□□□□□ -0.23
ABCA1O95477 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 SNX29P1-201ENST00000548357 1007 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 AL133215.2-201ENST00000609242 977 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 PCDHB19P-201ENST00000570871 2371 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 RPL37AP1-201ENST00000412502 279 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCA1O95477 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 AC044860.1-202ENST00000559481 777 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCA1O95477 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.6□□□□□ -0.23
ABCA1O95477 AP001350.2-201ENST00000625104 1094 ntBASIC13.6□□□□□ -0.23
ABCA1O95477 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCA1O95477 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCA1O95477 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ABCA1O95477 AC112492.5-201ENST00000421897 457 ntBASIC13.59□□□□□ -0.23
ABCA1O95477 RN7SL618P-201ENST00000477850 296 ntBASIC13.59□□□□□ -0.23
ABCA1O95477 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCA1O95477 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 AL671710.1-201ENST00000610245 2349 ntBASIC13.59□□□□□ -0.23
ABCA1O95477 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms