Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC4O75487 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.3■□□□□ 0.2
GPC4O75487 AC002347.1-201ENST00000569543 541 ntBASIC16.3■□□□□ 0.2
GPC4O75487 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC4O75487 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GPC4O75487 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GPC4O75487 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC4O75487 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC4O75487 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC4O75487 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC4O75487 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 AL596087.1-201ENST00000400979 1969 ntBASIC16.29■□□□□ 0.2
GPC4O75487 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GPC4O75487 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 AC024909.3-201ENST00000611513 2257 ntBASIC16.29■□□□□ 0.2
GPC4O75487 AC103702.1-201ENST00000548801 2630 ntBASIC16.29■□□□□ 0.2
GPC4O75487 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC4O75487 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC4O75487 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC4O75487 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms