Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.41□□□□□ -0.1
GMDSO60547 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.41□□□□□ -0.1
GMDSO60547 AL353732.1-201ENST00000569618 1459 ntBASIC14.41□□□□□ -0.1
GMDSO60547 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 KRT8P39-201ENST00000396270 1433 ntBASIC14.41□□□□□ -0.1
GMDSO60547 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 AC006058.4-201ENST00000624016 1670 ntBASIC14.4□□□□□ -0.1
GMDSO60547 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.4□□□□□ -0.1
GMDSO60547 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 RNA5SP415-201ENST00000517246 115 ntBASIC14.4□□□□□ -0.1
GMDSO60547 UNC93B6-202ENST00000528242 690 ntBASIC14.4□□□□□ -0.1
GMDSO60547 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 AL121894.2-201ENST00000602977 491 ntBASIC14.4□□□□□ -0.1
GMDSO60547 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 AP001350.2-201ENST00000625104 1094 ntBASIC14.4□□□□□ -0.1
GMDSO60547 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 AP005117.1-202ENST00000581724 1908 ntBASIC14.4□□□□□ -0.1
GMDSO60547 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 AL512652.2-201ENST00000625156 1716 ntBASIC14.4□□□□□ -0.1
GMDSO60547 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 FAM45BP-202ENST00000592932 1624 ntBASIC14.4□□□□□ -0.1
GMDSO60547 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.4□□□□□ -0.1
GMDSO60547 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GMDSO60547 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.4□□□□□ -0.1
GMDSO60547 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.4□□□□□ -0.11
GMDSO60547 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.11
GMDSO60547 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 CRYGEP-201ENST00000412192 528 ntBASIC14.39□□□□□ -0.11
GMDSO60547 HCG4-201ENST00000418983 998 ntBASIC14.39□□□□□ -0.11
GMDSO60547 AC026396.1-201ENST00000419388 421 ntBASIC14.39□□□□□ -0.11
GMDSO60547 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 AC079776.4-201ENST00000511039 504 ntBASIC14.39□□□□□ -0.11
GMDSO60547 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.39□□□□□ -0.11
GMDSO60547 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 MIR4751-201ENST00000578027 74 ntBASIC14.39□□□□□ -0.11
GMDSO60547 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 NORAD-201ENST00000565493 5339 ntBASIC14.39□□□□□ -0.11
GMDSO60547 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms