Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 HLA-J-202ENST00000469281 1241 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 DUX4L27-201ENST00000554796 1261 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 MIR4453-201ENST00000584019 89 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 SPTSSB-204ENST00000617024 1292 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AC092364.2-201ENST00000596710 2692 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 HYMAI-201ENST00000635591 3347 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.37□□□□□ -0.27
A0A1W2PRF3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
A0A1W2PRF3 AP3S2-216ENST00000617003 1561 ntBASIC13.37□□□□□ -0.27
A0A1W2PRF3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 AC005622.1-201ENST00000636801 1703 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 MIR346-201ENST00000362234 95 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 AC142381.1-201ENST00000426099 345 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 AC125807.1-201ENST00000483097 614 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 GGT3P-204ENST00000453783 1664 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 TUBB3P1-201ENST00000405796 1332 ntBASIC13.36□□□□□ -0.27
A0A1W2PRF3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.36□□□□□ -0.27
A0A1W2PRF3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
A0A1W2PRF3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
A0A1W2PRF3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.35□□□□□ -0.27
A0A1W2PRF3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
A0A1W2PRF3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
A0A1W2PRF3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
A0A1W2PRF3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
A0A1W2PRF3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.35□□□□□ -0.27
A0A1W2PRF3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
A0A1W2PRF3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms