Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCA3Q99758 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.04■□□□□ 0.96
ABCA3Q99758 AP000346.4-201ENST00000614827 381 ntBASIC21.04■□□□□ 0.96
ABCA3Q99758 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCA3Q99758 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ABCA3Q99758 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCA3Q99758 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ABCA3Q99758 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
ABCA3Q99758 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.03■□□□□ 0.96
ABCA3Q99758 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.03■□□□□ 0.96
ABCA3Q99758 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.03■□□□□ 0.96
ABCA3Q99758 RN7SL769P-201ENST00000469386 295 ntBASIC21.03■□□□□ 0.96
ABCA3Q99758 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.03■□□□□ 0.96
ABCA3Q99758 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCA3Q99758 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCA3Q99758 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.03■□□□□ 0.96
ABCA3Q99758 AP003419.4-201ENST00000616071 517 ntBASIC21.03■□□□□ 0.96
ABCA3Q99758 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.03■□□□□ 0.96
ABCA3Q99758 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCA3Q99758 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCA3Q99758 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.03■□□□□ 0.96
ABCA3Q99758 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.02■□□□□ 0.96
ABCA3Q99758 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.02■□□□□ 0.96
ABCA3Q99758 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.02■□□□□ 0.96
ABCA3Q99758 RPL17P11-201ENST00000417593 544 ntBASIC21.02■□□□□ 0.96
ABCA3Q99758 AL354877.1-201ENST00000424412 413 ntBASIC21.02■□□□□ 0.96
ABCA3Q99758 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.02■□□□□ 0.96
ABCA3Q99758 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.02■□□□□ 0.96
ABCA3Q99758 NKAIN1P1-201ENST00000435754 582 ntBASIC21.02■□□□□ 0.96
ABCA3Q99758 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.02■□□□□ 0.96
ABCA3Q99758 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ABCA3Q99758 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC21.02■□□□□ 0.96
ABCA3Q99758 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.02■□□□□ 0.96
ABCA3Q99758 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.02■□□□□ 0.96
ABCA3Q99758 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ABCA3Q99758 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.02■□□□□ 0.95
ABCA3Q99758 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ABCA3Q99758 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
ABCA3Q99758 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 AC008132.1-202ENST00000342005 1389 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ABCA3Q99758 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 ACTG1P2-201ENST00000415776 1125 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 ACTG1P11-201ENST00000425411 1125 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.01■□□□□ 0.95
ABCA3Q99758 RNA5SP486-201ENST00000515961 83 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 AL645939.5-201ENST00000606834 243 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 AP005019.2-201ENST00000615104 511 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 AC079336.7-201ENST00000623428 1078 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ABCA3Q99758 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.01■□□□□ 0.95
ABCA3Q99758 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ABCA3Q99758 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ABCA3Q99758 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 RN7SL720P-201ENST00000488178 304 ntBASIC21.01■□□□□ 0.95
ABCA3Q99758 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.01■□□□□ 0.95
ABCA3Q99758 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ABCA3Q99758 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCA3Q99758 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21■□□□□ 0.95
ABCA3Q99758 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21■□□□□ 0.95
ABCA3Q99758 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21■□□□□ 0.95
ABCA3Q99758 NUP210P1-202ENST00000504322 710 ntBASIC21■□□□□ 0.95
ABCA3Q99758 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21■□□□□ 0.95
ABCA3Q99758 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms