Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 ARMC10P1-201ENST00000313754 855 ntBASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 MIR4492-201ENST00000581627 80 ntBASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AC016734.2-201ENST00000624325 1377 ntBASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 AC232323.1-201ENST00000540724 2099 ntBASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 REXO1L5P-201ENST00000622260 2098 ntBASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 MINOS1P3-201ENST00000457048 203 ntBASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 LINC00552-201ENST00000625151 2579 ntBASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CHMP6Q96FZ7 AC148477.5-201ENST00000625164 1645 ntBASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms