Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE4Q96A23 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE4Q96A23 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 AC061975.2-201ENST00000581722 295 ntBASIC14.57□□□□□ -0.08
CPNE4Q96A23 MIR4321-201ENST00000592276 80 ntBASIC14.57□□□□□ -0.08
CPNE4Q96A23 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 REXO1L8P-201ENST00000604378 1897 ntBASIC14.57□□□□□ -0.08
CPNE4Q96A23 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE4Q96A23 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE4Q96A23 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC245100.5-201ENST00000452108 331 ntBASIC14.56□□□□□ -0.08
CPNE4Q96A23 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC026979.3-201ENST00000607315 403 ntBASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC003101.2-201ENST00000612557 442 ntBASIC14.56□□□□□ -0.08
CPNE4Q96A23 AC007967.4-201ENST00000614700 386 ntBASIC14.56□□□□□ -0.08
CPNE4Q96A23 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE4Q96A23 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE4Q96A23 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms