Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 POM121L3P-201ENST00000419331 1163 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 BX276092.5-203ENST00000456199 560 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 AC063952.2-201ENST00000498792 1227 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 AL160237.2-201ENST00000556165 472 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 AL121672.3-201ENST00000608644 468 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 CICP4-201ENST00000447359 2812 ntBASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.14■□□□□ 0.17
CKAP2Q8WWK9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 AC016734.2-201ENST00000624325 1377 ntBASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 HCG4-201ENST00000418983 998 ntBASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 PKD1P5-201ENST00000532415 10291 ntBASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CKAP2Q8WWK9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms