Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMIM4Q8WVI0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 AL353732.1-201ENST00000569618 1459 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ARMC10P1-201ENST00000313754 855 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 TSPY5P-201ENST00000426936 936 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 AC087163.2-201ENST00000457299 853 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 AC087641.1-201ENST00000557561 1021 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 NCF1C-201ENST00000438382 1427 ntBASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM4Q8WVI0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 FGD5P1-202ENST00000614866 2498 ntBASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 TMEM191A-211ENST00000637163 1067 ntBASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 AC126755.1-201ENST00000525846 6405 ntBASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMIM4Q8WVI0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms