Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC60Q8IWA6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 AL589987.1-201ENST00000453380 819 ntBASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 AP005018.1-201ENST00000525475 301 ntBASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC60Q8IWA6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 AC007541.1-201ENST00000570282 1469 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 SPDYE19P-201ENST00000338590 713 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 HAUS4P1-201ENST00000406739 1145 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 SRD5A3P1-201ENST00000603021 949 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC60Q8IWA6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CCDC60Q8IWA6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 DOC2GP-202ENST00000514950 1163 ntBASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 API5-211ENST00000534695 560 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC60Q8IWA6 AC074044.1-201ENST00000609673 707 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms