Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
APLFQ8IW19 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 AP002414.1-201ENST00000391405 1147 ntBASIC16.16■□□□□ 0.18
APLFQ8IW19 AL645939.2-201ENST00000427340 991 ntBASIC16.16■□□□□ 0.18
APLFQ8IW19 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.16■□□□□ 0.18
APLFQ8IW19 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 AP002472.1-201ENST00000577490 586 ntBASIC16.16■□□□□ 0.18
APLFQ8IW19 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.16■□□□□ 0.18
APLFQ8IW19 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
APLFQ8IW19 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
APLFQ8IW19 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.16■□□□□ 0.18
APLFQ8IW19 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APLFQ8IW19 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 AL359183.1-201ENST00000623796 2132 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.15■□□□□ 0.18
APLFQ8IW19 IGLL3P-201ENST00000412472 434 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.15■□□□□ 0.18
APLFQ8IW19 ACTG1P14-201ENST00000446382 1122 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 CEND1P1-201ENST00000451006 455 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
APLFQ8IW19 STK19B-204ENST00000512515 211 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.15■□□□□ 0.18
APLFQ8IW19 AC109462.3-201ENST00000573934 613 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 AL078644.1-201ENST00000609881 752 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.15■□□□□ 0.18
APLFQ8IW19 SNX18-202ENST00000343017 3140 ntBASIC16.15■□□□□ 0.18
APLFQ8IW19 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APLFQ8IW19 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
APLFQ8IW19 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms