Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 GGT4P-201ENST00000623672 1708 ntBASIC15.05■□□□□ -0
TUBA1AQ71U36 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.05■□□□□ -0
TUBA1AQ71U36 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.05■□□□□ -0
TUBA1AQ71U36 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.04■□□□□ -0
TUBA1AQ71U36 AC006449.6-201ENST00000612330 2296 ntBASIC15.04■□□□□ -0
TUBA1AQ71U36 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
TUBA1AQ71U36 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.04■□□□□ -0
TUBA1AQ71U36 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 AL590787.1-201ENST00000568856 1315 ntBASIC15.04■□□□□ -0
TUBA1AQ71U36 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.04■□□□□ -0
TUBA1AQ71U36 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.04■□□□□ -0
TUBA1AQ71U36 PTCHD3P3-201ENST00000403073 906 ntBASIC15.04■□□□□ -0
TUBA1AQ71U36 AP000347.1-202ENST00000435868 847 ntBASIC15.04■□□□□ -0
TUBA1AQ71U36 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.04■□□□□ -0
TUBA1AQ71U36 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.04■□□□□ -0
TUBA1AQ71U36 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.04■□□□□ -0
TUBA1AQ71U36 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TUBA1AQ71U36 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
TUBA1AQ71U36 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 RPS15P9-201ENST00000494093 319 ntBASIC15.03■□□□□ -0
TUBA1AQ71U36 RNA5SP415-201ENST00000517246 115 ntBASIC15.03■□□□□ -0
TUBA1AQ71U36 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.03■□□□□ -0
TUBA1AQ71U36 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 AC005593.1-201ENST00000624894 515 ntBASIC15.03■□□□□ -0
TUBA1AQ71U36 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
TUBA1AQ71U36 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TUBA1AQ71U36 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TUBA1AQ71U36 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms