Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01554Q52M75 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01554Q52M75 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ISG20-202ENST00000379224 540 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AP000593.1-201ENST00000393668 712 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 HLA-L-209ENST00000420110 1011 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 AL353807.1-201ENST00000427475 662 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AC090192.1-201ENST00000517740 490 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 MMAB-206ENST00000540016 945 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CKBP1-201ENST00000565489 1086 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AC124016.1-201ENST00000609552 612 ntBASIC8.22□□□□□ -1.09
LINC01554Q52M75 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 GSN-215ENST00000545652 2428 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
LINC01554Q52M75 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01554Q52M75 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms