Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EPHB4P54760 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EPHB4P54760 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHB4P54760 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB4P54760 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
EPHB4P54760 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB4P54760 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
EPHB4P54760 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.21■□□□□ 0.51
EPHB4P54760 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHB4P54760 AL589739.1-201ENST00000607720 493 ntBASIC18.21■□□□□ 0.51
EPHB4P54760 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 AC092068.3-201ENST00000587894 2016 ntBASIC18.21■□□□□ 0.51
EPHB4P54760 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.21■□□□□ 0.51
EPHB4P54760 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 RNF216P1-203ENST00000404404 2427 ntBASIC18.21■□□□□ 0.51
EPHB4P54760 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
EPHB4P54760 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHB4P54760 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
EPHB4P54760 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHB4P54760 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 AL035456.1-201ENST00000456064 1369 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
EPHB4P54760 CETN4P-206ENST00000642099 2168 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
EPHB4P54760 REXO1L6P-201ENST00000603433 1515 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 AC022188.1-201ENST00000620960 1664 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB4P54760 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
EPHB4P54760 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.2■□□□□ 0.5
EPHB4P54760 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB4P54760 BANF1P1-201ENST00000553684 263 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 AC091167.2-201ENST00000579581 588 ntBASIC18.2■□□□□ 0.5
EPHB4P54760 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHB4P54760 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHB4P54760 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHB4P54760 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EPHB4P54760 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EPHB4P54760 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
EPHB4P54760 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.19■□□□□ 0.5
EPHB4P54760 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHB4P54760 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms