Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC25A1P53007 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 KRT19P2-202ENST00000557173 1012 ntBASIC14.4□□□□□ -0.1
SLC25A1P53007 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC25A1P53007 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC25A1P53007 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC25A1P53007 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC25A1P53007 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC25A1P53007 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 SLC25A6P4-201ENST00000586535 553 ntBASIC14.39□□□□□ -0.11
SLC25A1P53007 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC25A1P53007 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC25A1P53007 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC25A1P53007 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC25A1P53007 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC25A1P53007 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC25A1P53007 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC25A1P53007 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC25A1P53007 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.38□□□□□ -0.11
SLC25A1P53007 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC25A1P53007 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC25A1P53007 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms