Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2AP49459 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2AP49459 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 AL513523.2-202ENST00000427283 2040 ntBASIC10.36□□□□□ -0.75
UBE2AP49459 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
UBE2AP49459 GCK-209ENST00000616242 2260 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2AP49459 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2AP49459 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2AP49459 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
UBE2AP49459 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2AP49459 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 AC087386.2-201ENST00000623212 4637 ntBASIC10.35□□□□□ -0.75
UBE2AP49459 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 HCG4-201ENST00000418983 998 ntBASIC10.35□□□□□ -0.75
UBE2AP49459 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 KRT18P67-201ENST00000432816 1264 ntBASIC10.35□□□□□ -0.75
UBE2AP49459 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.35□□□□□ -0.75
UBE2AP49459 MIR4751-201ENST00000578027 74 ntBASIC10.35□□□□□ -0.75
UBE2AP49459 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2AP49459 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.35□□□□□ -0.75
UBE2AP49459 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2AP49459 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
UBE2AP49459 STRCP1-201ENST00000509801 5328 ntBASIC10.35□□□□□ -0.75
UBE2AP49459 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
UBE2AP49459 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 AC026691.1-201ENST00000602502 2017 ntBASIC10.34□□□□□ -0.75
UBE2AP49459 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.34□□□□□ -0.75
UBE2AP49459 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
UBE2AP49459 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.34□□□□□ -0.75
UBE2AP49459 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.34□□□□□ -0.75
UBE2AP49459 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
UBE2AP49459 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBE2AP49459 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 HYMAI-201ENST00000635591 3347 ntBASIC10.34□□□□□ -0.75
UBE2AP49459 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.34□□□□□ -0.75
UBE2AP49459 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2AP49459 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms