Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KRT18P27-201ENST00000427733 1299 ntBASIC14.79□□□□□ -0.04
CENPAP49450 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 HNRNPDP1-201ENST00000439535 754 ntBASIC14.79□□□□□ -0.04
CENPAP49450 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.79□□□□□ -0.04
CENPAP49450 AC092910.1-201ENST00000482027 1129 ntBASIC14.79□□□□□ -0.04
CENPAP49450 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.79□□□□□ -0.04
CENPAP49450 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.79□□□□□ -0.04
CENPAP49450 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.79□□□□□ -0.04
CENPAP49450 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.79□□□□□ -0.04
CENPAP49450 AC004790.2-201ENST00000623588 572 ntBASIC14.79□□□□□ -0.04
CENPAP49450 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.79□□□□□ -0.04
CENPAP49450 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CENPAP49450 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 AC006449.6-201ENST00000612330 2296 ntBASIC14.78□□□□□ -0.04
CENPAP49450 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 AL596087.1-201ENST00000400979 1969 ntBASIC14.78□□□□□ -0.04
CENPAP49450 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.78□□□□□ -0.04
CENPAP49450 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CENPAP49450 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.78□□□□□ -0.04
CENPAP49450 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 KRT18P67-201ENST00000432816 1264 ntBASIC14.78□□□□□ -0.04
CENPAP49450 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.78□□□□□ -0.04
CENPAP49450 MIR4751-201ENST00000578027 74 ntBASIC14.78□□□□□ -0.04
CENPAP49450 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.78□□□□□ -0.04
CENPAP49450 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.78□□□□□ -0.04
CENPAP49450 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CENPAP49450 AP002414.2-201ENST00000591780 3365 ntBASIC14.77□□□□□ -0.04
CENPAP49450 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.77□□□□□ -0.04
CENPAP49450 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 AC012569.1-201ENST00000591191 1524 ntBASIC14.77□□□□□ -0.04
CENPAP49450 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.77□□□□□ -0.04
CENPAP49450 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.77□□□□□ -0.04
CENPAP49450 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CENPAP49450 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CENPAP49450 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.77□□□□□ -0.04
CENPAP49450 AC004870.1-201ENST00000315132 882 ntBASIC14.77□□□□□ -0.05
CENPAP49450 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.77□□□□□ -0.05
CENPAP49450 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms