Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CHMLP26374 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMLP26374 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
CHMLP26374 AC112482.1-201ENST00000492080 688 ntBASIC19.5■□□□□ 0.71
CHMLP26374 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CHMLP26374 MIR4469-201ENST00000583919 79 ntBASIC19.5■□□□□ 0.71
CHMLP26374 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMLP26374 AL513210.1-201ENST00000629608 234 ntBASIC19.5■□□□□ 0.71
CHMLP26374 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMLP26374 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CHMLP26374 UXT-AS1-201ENST00000590504 1525 ntBASIC19.5■□□□□ 0.71
CHMLP26374 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
CHMLP26374 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
CHMLP26374 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMLP26374 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMLP26374 HLA-H-201ENST00000383620 1096 ntBASIC19.49■□□□□ 0.71
CHMLP26374 FAM58DP-201ENST00000428076 619 ntBASIC19.49■□□□□ 0.71
CHMLP26374 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMLP26374 DNAJB3-201ENST00000446806 729 ntBASIC19.49■□□□□ 0.71
CHMLP26374 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMLP26374 AC093520.2-201ENST00000561830 333 ntBASIC19.49■□□□□ 0.71
CHMLP26374 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMLP26374 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMLP26374 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMLP26374 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMLP26374 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMLP26374 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMLP26374 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMLP26374 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHMLP26374 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CHMLP26374 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.48■□□□□ 0.71
CHMLP26374 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHMLP26374 RPSAP43-201ENST00000402237 625 ntBASIC19.48■□□□□ 0.71
CHMLP26374 RPS8P6-201ENST00000426177 609 ntBASIC19.48■□□□□ 0.71
CHMLP26374 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CHMLP26374 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CHMLP26374 AC018892.3-201ENST00000623986 2499 ntBASIC19.48■□□□□ 0.71
CHMLP26374 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHMLP26374 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMLP26374 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMLP26374 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 AC092384.3-202ENST00000564646 2873 ntBASIC19.47■□□□□ 0.71
CHMLP26374 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMLP26374 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHMLP26374 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CHMLP26374 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMLP26374 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHMLP26374 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CHMLP26374 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 AC004461.1-201ENST00000412461 403 ntBASIC19.47■□□□□ 0.71
CHMLP26374 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMLP26374 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.47■□□□□ 0.71
CHMLP26374 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMLP26374 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.47■□□□□ 0.71
CHMLP26374 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMLP26374 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms