Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MIR943-201ENST00000401286 94 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 BCRP1-201ENST00000444246 691 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 RNA5SP421-201ENST00000516864 134 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AP002490.2-201ENST00000524791 560 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AC008677.1-201ENST00000519230 1561 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.71□□□□□ -0.05
TMIGD3P0DMS9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.71□□□□□ -0.06
TMIGD3P0DMS9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMIGD3P0DMS9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms