Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RB1P06400 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RB1P06400 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 AC074338.1-201ENST00000416825 156 ntBASIC16.99■□□□□ 0.31
RB1P06400 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.99■□□□□ 0.31
RB1P06400 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.99■□□□□ 0.31
RB1P06400 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.99■□□□□ 0.31
RB1P06400 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.99■□□□□ 0.31
RB1P06400 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 AC010328.2-201ENST00000597698 1111 ntBASIC16.99■□□□□ 0.31
RB1P06400 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
RB1P06400 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
RB1P06400 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.98■□□□□ 0.31
RB1P06400 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RB1P06400 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.98■□□□□ 0.31
RB1P06400 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 C1QBPP1-201ENST00000400117 770 ntBASIC16.98■□□□□ 0.31
RB1P06400 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.98■□□□□ 0.31
RB1P06400 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RB1P06400 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.98■□□□□ 0.31
RB1P06400 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.98■□□□□ 0.31
RB1P06400 AC120045.2-201ENST00000567334 178 ntBASIC16.98■□□□□ 0.31
RB1P06400 AP001063.1-201ENST00000568332 529 ntBASIC16.98■□□□□ 0.31
RB1P06400 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
RB1P06400 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.98■□□□□ 0.31
RB1P06400 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
RB1P06400 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.98■□□□□ 0.31
RB1P06400 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RB1P06400 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 AL603756.1-201ENST00000606511 2163 ntBASIC16.97■□□□□ 0.31
RB1P06400 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 AC012441.1-201ENST00000446669 685 ntBASIC16.97■□□□□ 0.31
RB1P06400 POU5F1P6-201ENST00000466990 990 ntBASIC16.97■□□□□ 0.31
RB1P06400 AC099548.2-209ENST00000480264 625 ntBASIC16.97■□□□□ 0.31
RB1P06400 FTH1P14-201ENST00000482930 551 ntBASIC16.97■□□□□ 0.31
RB1P06400 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.97■□□□□ 0.31
RB1P06400 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.97■□□□□ 0.31
RB1P06400 DUX4L45-201ENST00000566406 1057 ntBASIC16.97■□□□□ 0.31
RB1P06400 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 AL139099.5-201ENST00000635274 300 ntBASIC16.97■□□□□ 0.31
RB1P06400 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RB1P06400 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RB1P06400 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms