Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KRT6AP02538 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
KRT6AP02538 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KRT6AP02538 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KRT6AP02538 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.77■□□□□ 0.11
KRT6AP02538 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.76■□□□□ 0.11
KRT6AP02538 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 AP005117.1-202ENST00000581724 1908 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KRT6AP02538 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 BCAR1-209ENST00000546196 1340 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
KRT6AP02538 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 AC009078.2-202ENST00000463353 338 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 AC145285.3-201ENST00000564603 959 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 AL365330.1-201ENST00000607459 531 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 AC025580.3-201ENST00000617932 1424 ntBASIC15.76■□□□□ 0.11
KRT6AP02538 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
KRT6AP02538 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KRT6AP02538 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT6AP02538 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
KRT6AP02538 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT6AP02538 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT6AP02538 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT6AP02538 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT6AP02538 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT6AP02538 AC064836.3-201ENST00000607928 673 ntBASIC15.75■□□□□ 0.11
KRT6AP02538 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AC004877.2-201ENST00000623941 599 ntBASIC15.75■□□□□ 0.11
KRT6AP02538 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AC104109.2-201ENST00000602919 1418 ntBASIC15.75■□□□□ 0.11
KRT6AP02538 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms