Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF253O75346 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF253O75346 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 NPAP1P7-201ENST00000613027 823 ntBASIC12.71□□□□□ -0.37
ZNF253O75346 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 AP000550.4-202ENST00000639755 178 ntBASIC12.71□□□□□ -0.37
ZNF253O75346 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF253O75346 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF253O75346 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF253O75346 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF253O75346 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF253O75346 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.71□□□□□ -0.38
ZNF253O75346 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.71□□□□□ -0.38
ZNF253O75346 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.71□□□□□ -0.38
ZNF253O75346 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 LINC01144-201ENST00000626198 1710 ntBASIC12.71□□□□□ -0.38
ZNF253O75346 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF253O75346 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ZNF253O75346 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF253O75346 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 NUS1P2-201ENST00000417358 873 ntBASIC12.7□□□□□ -0.38
ZNF253O75346 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 ATP5G2P1-201ENST00000433580 426 ntBASIC12.7□□□□□ -0.38
ZNF253O75346 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF253O75346 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF253O75346 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 AC069148.1-201ENST00000608741 768 ntBASIC12.7□□□□□ -0.38
ZNF253O75346 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
ZNF253O75346 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 AL596087.1-201ENST00000400979 1969 ntBASIC12.7□□□□□ -0.38
ZNF253O75346 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 GGT4P-201ENST00000623672 1708 ntBASIC12.7□□□□□ -0.38
ZNF253O75346 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms