Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.5■□□□□ 0.07
LCMT2O60294 AL512356.2-201ENST00000546955 174 ntBASIC15.5■□□□□ 0.07
LCMT2O60294 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.5■□□□□ 0.07
LCMT2O60294 AC004449.1-201ENST00000564240 433 ntBASIC15.5■□□□□ 0.07
LCMT2O60294 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.5■□□□□ 0.07
LCMT2O60294 MIR4453-201ENST00000584019 89 ntBASIC15.5■□□□□ 0.07
LCMT2O60294 AC003101.2-201ENST00000612557 442 ntBASIC15.5■□□□□ 0.07
LCMT2O60294 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LCMT2O60294 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 MIR648-201ENST00000385046 94 ntBASIC15.49■□□□□ 0.07
LCMT2O60294 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.49■□□□□ 0.07
LCMT2O60294 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 AC069262.1-201ENST00000539058 672 ntBASIC15.49■□□□□ 0.07
LCMT2O60294 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.49■□□□□ 0.07
LCMT2O60294 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.49■□□□□ 0.07
LCMT2O60294 AL513477.1-201ENST00000602865 2407 ntBASIC15.49■□□□□ 0.07
LCMT2O60294 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
LCMT2O60294 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LCMT2O60294 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCMT2O60294 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
LCMT2O60294 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.49■□□□□ 0.07
LCMT2O60294 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LCMT2O60294 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LCMT2O60294 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LCMT2O60294 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.48■□□□□ 0.07
LCMT2O60294 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 HAUS4P1-201ENST00000406739 1145 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.48■□□□□ 0.07
LCMT2O60294 METTL21AP1-201ENST00000438852 635 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.48■□□□□ 0.07
LCMT2O60294 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 AC245100.5-201ENST00000452108 331 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 AC092183.1-201ENST00000469884 875 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms