Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.54■□□□□ 0.56
CYTH3O43739 AC004840.1-201ENST00000636359 365 ntBASIC18.54■□□□□ 0.56
CYTH3O43739 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
CYTH3O43739 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.54■□□□□ 0.56
CYTH3O43739 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
CYTH3O43739 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.54■□□□□ 0.56
CYTH3O43739 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.54■□□□□ 0.56
CYTH3O43739 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CYTH3O43739 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CYTH3O43739 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CYTH3O43739 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 AC112504.1-201ENST00000623415 1841 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 DOC2GP-204ENST00000639052 2548 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CYTH3O43739 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.53■□□□□ 0.56
CYTH3O43739 FO393414.2-201ENST00000405153 598 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.53■□□□□ 0.56
CYTH3O43739 FAM8A3P-201ENST00000427218 844 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.53■□□□□ 0.56
CYTH3O43739 AC044860.1-202ENST00000559481 777 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.53■□□□□ 0.56
CYTH3O43739 AC026691.1-201ENST00000602502 2017 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 AC004790.1-201ENST00000612686 536 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 LINC02447-202ENST00000501888 2146 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
CYTH3O43739 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.53■□□□□ 0.56
CYTH3O43739 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.53■□□□□ 0.56
CYTH3O43739 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CYTH3O43739 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CYTH3O43739 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 REXO1L1P-202ENST00000608646 1974 ntBASIC18.52■□□□□ 0.56
CYTH3O43739 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.52■□□□□ 0.56
CYTH3O43739 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.52■□□□□ 0.56
CYTH3O43739 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.52■□□□□ 0.56
CYTH3O43739 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 AL512638.1-201ENST00000457493 794 ntBASIC18.52■□□□□ 0.56
CYTH3O43739 RN7SL618P-201ENST00000477850 296 ntBASIC18.52■□□□□ 0.56
CYTH3O43739 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 RN7SL204P-201ENST00000582831 262 ntBASIC18.52■□□□□ 0.56
CYTH3O43739 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CYTH3O43739 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.52■□□□□ 0.56
CYTH3O43739 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.52■□□□□ 0.56
CYTH3O43739 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CYTH3O43739 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.52■□□□□ 0.56
CYTH3O43739 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTH3O43739 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CYTH3O43739 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTH3O43739 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTH3O43739 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTH3O43739 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTH3O43739 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.52■□□□□ 0.55
CYTH3O43739 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.52■□□□□ 0.55
CYTH3O43739 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTH3O43739 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTH3O43739 AC018695.7-201ENST00000624587 2492 ntBASIC18.51■□□□□ 0.55
CYTH3O43739 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms