Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KCNQ2O43526 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 AL355334.1-201ENST00000417713 215 ntBASIC20.54■□□□□ 0.88
KCNQ2O43526 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNQ2O43526 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 AC091804.1-201ENST00000486888 567 ntBASIC20.54■□□□□ 0.88
KCNQ2O43526 SLED1-202ENST00000512051 380 ntBASIC20.54■□□□□ 0.88
KCNQ2O43526 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNQ2O43526 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.54■□□□□ 0.88
KCNQ2O43526 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.54■□□□□ 0.88
KCNQ2O43526 MIR3619-201ENST00000579667 83 ntBASIC20.54■□□□□ 0.88
KCNQ2O43526 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KCNQ2O43526 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.54■□□□□ 0.88
KCNQ2O43526 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNQ2O43526 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNQ2O43526 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNQ2O43526 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNQ2O43526 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNQ2O43526 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KCNQ2O43526 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 ACKR1-201ENST00000368121 1240 ntBASIC20.53■□□□□ 0.88
KCNQ2O43526 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNQ2O43526 RPSAP36-202ENST00000494591 1261 ntBASIC20.53■□□□□ 0.88
KCNQ2O43526 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNQ2O43526 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.53■□□□□ 0.88
KCNQ2O43526 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNQ2O43526 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNQ2O43526 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNQ2O43526 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNQ2O43526 AC018735.1-201ENST00000437208 1502 ntBASIC20.53■□□□□ 0.88
KCNQ2O43526 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNQ2O43526 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
KCNQ2O43526 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KCNQ2O43526 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
KCNQ2O43526 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
KCNQ2O43526 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.52■□□□□ 0.88
KCNQ2O43526 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KCNQ2O43526 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNQ2O43526 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNQ2O43526 AC004898.1-201ENST00000451057 766 ntBASIC20.52■□□□□ 0.88
KCNQ2O43526 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNQ2O43526 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 AC104982.3-201ENST00000581995 514 ntBASIC20.52■□□□□ 0.88
KCNQ2O43526 AC020914.3-201ENST00000594712 304 ntBASIC20.52■□□□□ 0.88
KCNQ2O43526 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.52■□□□□ 0.88
KCNQ2O43526 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.52■□□□□ 0.88
KCNQ2O43526 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNQ2O43526 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNQ2O43526 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ2O43526 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
KCNQ2O43526 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ2O43526 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ2O43526 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ2O43526 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ2O43526 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.52■□□□□ 0.87
KCNQ2O43526 AHCYP2-201ENST00000430630 1300 ntBASIC20.52■□□□□ 0.87
KCNQ2O43526 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.51■□□□□ 0.87
KCNQ2O43526 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ2O43526 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ2O43526 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ2O43526 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNQ2O43526 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNQ2O43526 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms