Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.68□□□□□ -0.06
SURF4O15260 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SURF4O15260 AC105339.3-201ENST00000560043 636 ntBASIC14.68□□□□□ -0.06
SURF4O15260 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SURF4O15260 AL031055.1-201ENST00000606362 631 ntBASIC14.68□□□□□ -0.06
SURF4O15260 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.68□□□□□ -0.06
SURF4O15260 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.68□□□□□ -0.06
SURF4O15260 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SURF4O15260 TMBIM7P-203ENST00000641617 1718 ntBASIC14.68□□□□□ -0.06
SURF4O15260 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.68□□□□□ -0.06
SURF4O15260 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
SURF4O15260 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SURF4O15260 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.68□□□□□ -0.06
SURF4O15260 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SURF4O15260 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.68□□□□□ -0.06
SURF4O15260 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SURF4O15260 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 AC068418.2-201ENST00000577309 3703 ntBASIC14.67□□□□□ -0.06
SURF4O15260 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 HMGA1P7-201ENST00000406908 502 ntBASIC14.67□□□□□ -0.06
SURF4O15260 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.67□□□□□ -0.06
SURF4O15260 FAM185BP-201ENST00000443595 716 ntBASIC14.67□□□□□ -0.06
SURF4O15260 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.67□□□□□ -0.06
SURF4O15260 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 AL356488.2-201ENST00000602755 427 ntBASIC14.67□□□□□ -0.06
SURF4O15260 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SURF4O15260 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SURF4O15260 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SURF4O15260 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SURF4O15260 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SURF4O15260 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 AC006486.2-201ENST00000624246 2199 ntBASIC14.66□□□□□ -0.06
SURF4O15260 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SURF4O15260 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SURF4O15260 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SURF4O15260 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SURF4O15260 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms