Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.26■□□□□ 0.03
KPNA4O00629 SLC25A6P2-201ENST00000497974 877 ntBASIC15.26■□□□□ 0.03
KPNA4O00629 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KPNA4O00629 MPDU1-223ENST00000582151 728 ntBASIC15.26■□□□□ 0.03
KPNA4O00629 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 AC006557.2-201ENST00000592985 1240 ntBASIC15.26■□□□□ 0.03
KPNA4O00629 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.26■□□□□ 0.03
KPNA4O00629 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.26■□□□□ 0.03
KPNA4O00629 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KPNA4O00629 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.26■□□□□ 0.03
KPNA4O00629 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.26■□□□□ 0.03
KPNA4O00629 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.26■□□□□ 0.03
KPNA4O00629 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KPNA4O00629 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
KPNA4O00629 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 AC026748.1-201ENST00000624349 3251 ntBASIC15.25■□□□□ 0.03
KPNA4O00629 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.25■□□□□ 0.03
KPNA4O00629 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 AL359258.3-201ENST00000622910 2331 ntBASIC15.25■□□□□ 0.03
KPNA4O00629 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.25■□□□□ 0.03
KPNA4O00629 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.25■□□□□ 0.03
KPNA4O00629 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.25■□□□□ 0.03
KPNA4O00629 KRT18P56-201ENST00000507275 550 ntBASIC15.25■□□□□ 0.03
KPNA4O00629 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
KPNA4O00629 AL805961.1-202ENST00000641562 540 ntBASIC15.25■□□□□ 0.03
KPNA4O00629 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.25■□□□□ 0.03
KPNA4O00629 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.25■□□□□ 0.03
KPNA4O00629 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KPNA4O00629 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KPNA4O00629 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KPNA4O00629 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KPNA4O00629 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.24■□□□□ 0.03
KPNA4O00629 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.24■□□□□ 0.03
KPNA4O00629 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KPNA4O00629 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KPNA4O00629 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KPNA4O00629 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms