Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP3B1O00203 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 TSPY26P-202ENST00000565928 3884 ntBASIC16.41■□□□□ 0.22
AP3B1O00203 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.4■□□□□ 0.22
AP3B1O00203 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 MED15P5-201ENST00000423150 992 ntBASIC16.4■□□□□ 0.22
AP3B1O00203 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.4■□□□□ 0.22
AP3B1O00203 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.4■□□□□ 0.22
AP3B1O00203 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP3B1O00203 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 HYMAI-201ENST00000635591 3347 ntBASIC16.4■□□□□ 0.22
AP3B1O00203 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3B1O00203 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3B1O00203 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.4■□□□□ 0.22
AP3B1O00203 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.4■□□□□ 0.22
AP3B1O00203 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.39■□□□□ 0.22
AP3B1O00203 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
AP3B1O00203 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
AP3B1O00203 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP3B1O00203 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP3B1O00203 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP3B1O00203 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3B1O00203 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.39■□□□□ 0.21
AP3B1O00203 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3B1O00203 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 AC008741.2-201ENST00000612792 3115 ntBASIC16.39■□□□□ 0.21
AP3B1O00203 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3B1O00203 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3B1O00203 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP3B1O00203 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 AC067930.6-201ENST00000623257 4947 ntBASIC16.38■□□□□ 0.21
AP3B1O00203 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AP3B1O00203 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms