Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ATP5G2P3-201ENST00000429083 425 ntBASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 AC126177.7-201ENST00000547904 679 ntBASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 SLC6A10P-202ENST00000431994 2058 ntBASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 AC097639.1-201ENST00000565519 1891 ntBASIC18.8■□□□□ 0.6
LSM4Q9Y4Z0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 AL359258.2-201ENST00000564063 1566 ntBASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.79■□□□□ 0.6
LSM4Q9Y4Z0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 LINC00543-201ENST00000567234 1845 ntBASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LSM4Q9Y4Z0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM4Q9Y4Z0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM4Q9Y4Z0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LSM4Q9Y4Z0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM4Q9Y4Z0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LSM4Q9Y4Z0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 AC012676.1-201ENST00000574705 1949 ntBASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 AC133561.1-201ENST00000568600 2415 ntBASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
LSM4Q9Y4Z0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 AC141586.4-201ENST00000624558 1573 ntBASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 AL157400.5-201ENST00000507624 621 ntBASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM4Q9Y4Z0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 RARRES2P1-201ENST00000474487 481 ntBASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM4Q9Y4Z0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms