Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 AC142472.1-201ENST00000612013 1741 ntBASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMCO4Q9NRQ5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 AC007375.3-201ENST00000600936 2314 ntBASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
SMCO4Q9NRQ5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 AC127496.7-201ENST00000625110 1798 ntBASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.6■□□□□ 0.57
SMCO4Q9NRQ5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SMCO4Q9NRQ5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO4Q9NRQ5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMCO4Q9NRQ5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SMCO4Q9NRQ5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO4Q9NRQ5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO4Q9NRQ5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO4Q9NRQ5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMCO4Q9NRQ5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMCO4Q9NRQ5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMCO4Q9NRQ5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.56■□□□□ 0.56
SMCO4Q9NRQ5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMCO4Q9NRQ5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMCO4Q9NRQ5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMCO4Q9NRQ5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMCO4Q9NRQ5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMCO4Q9NRQ5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.55■□□□□ 0.56
SMCO4Q9NRQ5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMCO4Q9NRQ5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMCO4Q9NRQ5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMCO4Q9NRQ5 LINC00526-201ENST00000581067 1875 ntBASIC18.53■□□□□ 0.56
SMCO4Q9NRQ5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMCO4Q9NRQ5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.53■□□□□ 0.56
SMCO4Q9NRQ5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMCO4Q9NRQ5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SMCO4Q9NRQ5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMCO4Q9NRQ5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMCO4Q9NRQ5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.52■□□□□ 0.55
SMCO4Q9NRQ5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SMCO4Q9NRQ5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMCO4Q9NRQ5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMCO4Q9NRQ5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMCO4Q9NRQ5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.51■□□□□ 0.55
SMCO4Q9NRQ5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.51■□□□□ 0.55
SMCO4Q9NRQ5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms