Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.61■■□□□ 1.21
BRF2Q9HAW0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.61■■□□□ 1.21
BRF2Q9HAW0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 AL592293.1-201ENST00000502889 1188 ntBASIC22.6■■□□□ 1.21
BRF2Q9HAW0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
BRF2Q9HAW0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
BRF2Q9HAW0 FOXO3B-201ENST00000395675 1928 ntBASIC22.59■■□□□ 1.21
BRF2Q9HAW0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF2Q9HAW0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
BRF2Q9HAW0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
BRF2Q9HAW0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BRF2Q9HAW0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.58■■□□□ 1.21
BRF2Q9HAW0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
BRF2Q9HAW0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
BRF2Q9HAW0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 AC018755.3-202ENST00000596210 929 ntBASIC22.57■■□□□ 1.2
BRF2Q9HAW0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.57■■□□□ 1.2
BRF2Q9HAW0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF2Q9HAW0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF2Q9HAW0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.56■■□□□ 1.2
BRF2Q9HAW0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF2Q9HAW0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF2Q9HAW0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF2Q9HAW0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF2Q9HAW0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF2Q9HAW0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.54■■□□□ 1.2
BRF2Q9HAW0 RPS2P7-201ENST00000447334 885 ntBASIC22.54■■□□□ 1.2
BRF2Q9HAW0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRF2Q9HAW0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.54■■□□□ 1.2
BRF2Q9HAW0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BRF2Q9HAW0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 SPCS2P3-201ENST00000500401 656 ntBASIC22.53■■□□□ 1.2
BRF2Q9HAW0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRF2Q9HAW0 LINC01124-201ENST00000409786 2117 ntBASIC22.52■■□□□ 1.2
BRF2Q9HAW0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
BRF2Q9HAW0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRF2Q9HAW0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRF2Q9HAW0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.52■■□□□ 1.2
BRF2Q9HAW0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BRF2Q9HAW0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
BRF2Q9HAW0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 MIR6765-201ENST00000614092 87 ntBASIC22.51■■□□□ 1.19
BRF2Q9HAW0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRF2Q9HAW0 AC141586.4-201ENST00000624558 1573 ntBASIC22.5■■□□□ 1.19
BRF2Q9HAW0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BRF2Q9HAW0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.5■■□□□ 1.19
BRF2Q9HAW0 LINC00543-201ENST00000567234 1845 ntBASIC22.5■■□□□ 1.19
BRF2Q9HAW0 U85056.1-201ENST00000616429 682 ntBASIC22.5■■□□□ 1.19
BRF2Q9HAW0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 DUX4L9-201ENST00000449051 1259 ntBASIC22.49■■□□□ 1.19
BRF2Q9HAW0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 AC087393.1-201ENST00000582896 145 ntBASIC22.49■■□□□ 1.19
BRF2Q9HAW0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.49■■□□□ 1.19
BRF2Q9HAW0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
BRF2Q9HAW0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms