Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS16Q9H269 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
VPS16Q9H269 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS16Q9H269 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
VPS16Q9H269 RP9P-202ENST00000450133 1212 ntBASIC25.9■■□□□ 1.74
VPS16Q9H269 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VPS16Q9H269 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.9■■□□□ 1.74
VPS16Q9H269 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VPS16Q9H269 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
VPS16Q9H269 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VPS16Q9H269 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
VPS16Q9H269 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
VPS16Q9H269 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.89■■□□□ 1.73
VPS16Q9H269 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS16Q9H269 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS16Q9H269 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS16Q9H269 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.88■■□□□ 1.73
VPS16Q9H269 AC093536.1-201ENST00000569153 554 ntBASIC25.88■■□□□ 1.73
VPS16Q9H269 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
VPS16Q9H269 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS16Q9H269 LINC00543-201ENST00000567234 1845 ntBASIC25.87■■□□□ 1.73
VPS16Q9H269 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS16Q9H269 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS16Q9H269 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
VPS16Q9H269 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS16Q9H269 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS16Q9H269 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS16Q9H269 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
VPS16Q9H269 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.86■■□□□ 1.73
VPS16Q9H269 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS16Q9H269 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS16Q9H269 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS16Q9H269 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS16Q9H269 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS16Q9H269 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.85■■□□□ 1.73
VPS16Q9H269 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS16Q9H269 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS16Q9H269 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS16Q9H269 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.84■■□□□ 1.73
VPS16Q9H269 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS16Q9H269 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.84■■□□□ 1.73
VPS16Q9H269 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
VPS16Q9H269 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS16Q9H269 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.84■■□□□ 1.73
VPS16Q9H269 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS16Q9H269 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS16Q9H269 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS16Q9H269 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
VPS16Q9H269 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VPS16Q9H269 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
VPS16Q9H269 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.82■■□□□ 1.72
VPS16Q9H269 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.82■■□□□ 1.72
VPS16Q9H269 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
VPS16Q9H269 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.82■■□□□ 1.72
VPS16Q9H269 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VPS16Q9H269 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.81■■□□□ 1.72
VPS16Q9H269 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS16Q9H269 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VPS16Q9H269 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS16Q9H269 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VPS16Q9H269 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
VPS16Q9H269 AC007029.1-201ENST00000604183 313 ntBASIC25.8■■□□□ 1.72
VPS16Q9H269 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
VPS16Q9H269 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
VPS16Q9H269 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS16Q9H269 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
VPS16Q9H269 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.8■■□□□ 1.72
VPS16Q9H269 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS16Q9H269 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.79■■□□□ 1.72
VPS16Q9H269 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.79■■□□□ 1.72
VPS16Q9H269 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.79■■□□□ 1.72
VPS16Q9H269 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
VPS16Q9H269 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS16Q9H269 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
VPS16Q9H269 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
VPS16Q9H269 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS16Q9H269 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VPS16Q9H269 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS16Q9H269 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS16Q9H269 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
VPS16Q9H269 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS16Q9H269 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VPS16Q9H269 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS16Q9H269 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.77■■□□□ 1.72
VPS16Q9H269 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
VPS16Q9H269 MIR6089-201ENST00000616698 64 ntBASIC25.76■■□□□ 1.71
VPS16Q9H269 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VPS16Q9H269 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
VPS16Q9H269 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms